STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C5FNK1Alpha/Beta hydrolase protein. (313 aa)    
Predicted Functional Partners:
A0A5C5FWV1
Tryptophan synthase.
    
 0.804
A0A5C5FQP9
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.757
A0A5C5G2E0
HAD-superfamily subfamily IIA hydrolase.
    
 0.734
A0A5C5FXK6
Indole-3-glycerol phosphate synthase-domain-containing protein.
   
 0.729
A0A5C5FUX2
Putative ser/thr protein phosphatase 2A regulatory subunit A.
    
 0.648
A0A5C5FX66
Uncharacterized protein.
    
 0.648
A0A5C5FT39
Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
 0.634
A0A5C5FRF3
Urea carboxylase.
  
 
 0.625
A0A5C5FUE7
Putative glutamyl-tRNA amidotransferase subunit A.
  
 
 0.625
A0A5C5FJY1
Acyl-CoA dehydrogenase/oxidase.
   
 0.615
Your Current Organism:
Rhodotorula diobovata
NCBI taxonomy Id: 5288
Other names: ATCC 22265, CBS 6085, CCRC 22473, CCRC:22473, IGC 4364, JCM 3787, MUCL 30314, NCYC 2642, NRRL Y-7196, R. diobovata, Rhodosporidium diobovatum, Rhodotorula diobovata (S.Y. Newell & I.L. Hunter) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.