STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C5FNL2Succinyl-CoA:3-ketoacid-coenzyme A transferase; Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate. (533 aa)    
Predicted Functional Partners:
A0A5C5G6Q0
Pyruvate carboxyltransferase domain-containing protein.
  
 
 0.952
A0A5C5FRR0
Thiolase, N-terminal domain-containing protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.947
A0A5C5FZA7
3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.940
A0A5C5G3H9
3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.940
A0A5C5G395
3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.
    
 0.935
A0A5C5FLV0
Thiolase, N-terminal domain-containing protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.897
A0A5C5G595
Putative acetyl-CoA C-acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.897
A0A5C5G8J7
Thiolase, N-terminal domain-containing protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.897
A0A5C5FVS8
SCP2 domain-containing protein.
  
 0.871
A0A5C5G838
Uncharacterized protein.
  
 0.871
Your Current Organism:
Rhodotorula diobovata
NCBI taxonomy Id: 5288
Other names: ATCC 22265, CBS 6085, CCRC 22473, CCRC:22473, IGC 4364, JCM 3787, MUCL 30314, NCYC 2642, NRRL Y-7196, R. diobovata, Rhodosporidium diobovatum, Rhodotorula diobovata (S.Y. Newell & I.L. Hunter) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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