STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C5FNS7Putative peptidyl-prolyl cis-trans isomerase. (381 aa)    
Predicted Functional Partners:
A0A5C5FRP7
HSP20-like chaperone.
   
 0.947
A0A5C5FMN7
Activator of Hsp90 ATPase.
   
 
 0.937
A0A5C5FP52
Flavin reductase like domain-containing protein.
   
 0.900
A0A5C5FV79
Heat shock protein 90.
   
 0.900
A0A5C5G1G1
Hamartin protein-domain-containing protein.
   
 0.900
A0A5C5G151
J domain-containing protein.
   
 
 0.889
A0A5C5FYZ7
Stress-induced-phospho protein 1.
  
 
 0.863
A0A5C5FVF0
Putative nuclear matrix protein.
   
 0.804
A0A5C5FM87
Pre-mRNA splicing factor.
   
 0.797
A0A5C5FL33
PPIase cyclophilin-type domain-containing protein.
  
0.796
Your Current Organism:
Rhodotorula diobovata
NCBI taxonomy Id: 5288
Other names: ATCC 22265, CBS 6085, CCRC 22473, CCRC:22473, IGC 4364, JCM 3787, MUCL 30314, NCYC 2642, NRRL Y-7196, R. diobovata, Rhodosporidium diobovatum, Rhodotorula diobovata (S.Y. Newell & I.L. Hunter) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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