STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C5FS49Glycosyl hydrolase catalytic core-domain-containing protein. (333 aa)    
Predicted Functional Partners:
A0A5C5FZ70
Fungal_trans domain-containing protein; Belongs to the universal ribosomal protein uL16 family.
   
 0.811
A0A5C5FSZ9
Putative ribosomal L10 protein.
   
 0.614
A0A5C5G1G6
Armadillo-type protein.
   
 0.614
A0A5C5G801
Translation protein SH3-like domain-containing protein.
   
 
 0.544
A0A5C5FME8
Uncharacterized protein.
    
 
 0.499
A0A5C5FMT4
Cytochrome c oxidase subunit 2; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1.
   
  
 0.497
A0A5C5FWJ2
STE/STE11/cdc15 protein kinase.
   
 
 0.472
A0A5C5FL90
ATP synthase subunit 9; Belongs to the ATPase C chain family.
   
  
 0.471
A0A5C5FNJ7
ATP synthase subunit 6.
   
  
 0.465
A0A5C5FRW4
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
    
 
 0.460
Your Current Organism:
Rhodotorula diobovata
NCBI taxonomy Id: 5288
Other names: ATCC 22265, CBS 6085, CCRC 22473, CCRC:22473, IGC 4364, JCM 3787, MUCL 30314, NCYC 2642, NRRL Y-7196, R. diobovata, Rhodosporidium diobovatum, Rhodotorula diobovata (S.Y. Newell & I.L. Hunter) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.