Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A5C5FRQ4 | A0A5C5FSX5 | Alpha/Beta hydrolase protein. | Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | 0.767 |
A0A5C5FRQ4 | A0A5C5FUW6 | Alpha/Beta hydrolase protein. | Putative ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | 0.538 |
A0A5C5FRQ4 | A0A5C5FVU3 | Alpha/Beta hydrolase protein. | Alpha-glucosidase. | 0.700 |
A0A5C5FRQ4 | A0A5C5FWB2 | Alpha/Beta hydrolase protein. | UTP--glucose-1-phosphate uridylyltransferase. | 0.765 |
A0A5C5FRQ4 | A0A5C5FZB5 | Alpha/Beta hydrolase protein. | Putative alpha-amylase. | 0.700 |
A0A5C5FRQ4 | A0A5C5G015 | Alpha/Beta hydrolase protein. | Putative phosphoglucomutase; Belongs to the phosphohexose mutase family. | 0.840 |
A0A5C5FRQ4 | A0A5C5G2P5 | Alpha/Beta hydrolase protein. | Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan. | 0.693 |
A0A5C5FRQ4 | A0A5C5G3P5 | Alpha/Beta hydrolase protein. | Uncharacterized protein. | 0.775 |
A0A5C5FSC0 | A0A5C5FSX5 | Glycosyltransferase family 8 protein. | Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | 0.770 |
A0A5C5FSC0 | A0A5C5FVU3 | Glycosyltransferase family 8 protein. | Alpha-glucosidase. | 0.489 |
A0A5C5FSC0 | A0A5C5FWB2 | Glycosyltransferase family 8 protein. | UTP--glucose-1-phosphate uridylyltransferase. | 0.929 |
A0A5C5FSC0 | A0A5C5FZB5 | Glycosyltransferase family 8 protein. | Putative alpha-amylase. | 0.484 |
A0A5C5FSC0 | A0A5C5G015 | Glycosyltransferase family 8 protein. | Putative phosphoglucomutase; Belongs to the phosphohexose mutase family. | 0.508 |
A0A5C5FSC0 | A0A5C5G2P5 | Glycosyltransferase family 8 protein. | Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan. | 0.997 |
A0A5C5FSC0 | A0A5C5G3P5 | Glycosyltransferase family 8 protein. | Uncharacterized protein. | 0.948 |
A0A5C5FSC0 | A0A5C5G3U4 | Glycosyltransferase family 8 protein. | Glycoside hydrolase. | 0.971 |
A0A5C5FSX5 | A0A5C5FRQ4 | Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | Alpha/Beta hydrolase protein. | 0.767 |
A0A5C5FSX5 | A0A5C5FSC0 | Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | Glycosyltransferase family 8 protein. | 0.770 |
A0A5C5FSX5 | A0A5C5FUW6 | Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | Putative ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | 0.906 |
A0A5C5FSX5 | A0A5C5FVU3 | Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | Alpha-glucosidase. | 0.729 |
page 1 of 6