STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C5FSZ5BAG domain-containing protein. (646 aa)    
Predicted Functional Partners:
A0A5C5FUY8
Uncharacterized protein.
    
 0.771
A0A5C5G2E0
HAD-superfamily subfamily IIA hydrolase.
    
  0.756
A0A5C5G1R1
RanBD1 domain-containing protein.
    
 0.744
A0A5C5FRL0
WD40-repeat-containing domain protein.
    
 0.719
A0A5C5FZ59
Set1 complex component ash2.
    
 0.717
A0A5C5FXB9
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.696
A0A5C5FSN6
Methyltransferase type 11.
    
 0.691
A0A5C5FND8
TPR_REGION domain-containing protein.
    
 0.683
A0A5C5FX04
Serine/threonine-protein kinase ATG1.
    
 0.683
A0A5C5FYF9
Protein transporter SEC13; Belongs to the WD repeat SEC13 family.
    
 0.680
Your Current Organism:
Rhodotorula diobovata
NCBI taxonomy Id: 5288
Other names: ATCC 22265, CBS 6085, CCRC 22473, CCRC:22473, IGC 4364, JCM 3787, MUCL 30314, NCYC 2642, NRRL Y-7196, R. diobovata, Rhodosporidium diobovatum, Rhodotorula diobovata (S.Y. Newell & I.L. Hunter) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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