STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C5FVF5Endonuclease/exonuclease/phosphatase. (726 aa)    
Predicted Functional Partners:
A0A5C5FNX0
Phosphoinositide phospholipase C.
     
 0.802
A0A5C5FVF0
Putative nuclear matrix protein.
    
   0.734
A0A5C5FVD5
PIPK domain-containing protein.
  
  
 0.729
A0A5C5FR04
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.713
A0A5C5FVT8
Inositol polyphosphate phosphatase.
 
  
 0.666
A0A5C5G3T4
Inositol polyphosphate phosphatase.
  
 
0.661
A0A5C5FP72
ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.
    
 0.648
A0A5C5G359
SacI homology domain-containing protein.
 
  
 0.647
A0A5C5G645
AP-1 complex subunit gamma.
    
  0.639
A0A5C5G1L0
Endonuclease/exonuclease/phosphatase.
     
0.620
Your Current Organism:
Rhodotorula diobovata
NCBI taxonomy Id: 5288
Other names: ATCC 22265, CBS 6085, CCRC 22473, CCRC:22473, IGC 4364, JCM 3787, MUCL 30314, NCYC 2642, NRRL Y-7196, R. diobovata, Rhodosporidium diobovatum, Rhodotorula diobovata (S.Y. Newell & I.L. Hunter) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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