STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C5FVJ3Proteophosphoglycan ppg4. (945 aa)    
Predicted Functional Partners:
A0A5C5FUB2
Cyclin-dependent protein kinase inhibitor.
   
 
 0.717
A0A5C5FNV2
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
    
 
 0.594
A0A5C5FPX2
Proteasome endopeptidase complex; Belongs to the peptidase T1A family.
    
 
 0.581
A0A5C5FSR5
VWFA domain-containing protein.
    
 
 0.556
A0A5C5FXE9
DSS1/SEM1 family-domain-containing protein.
    
 
 0.445
A0A5C5G163
BZIP domain-containing protein.
    
 
 0.434
A0A5C5FW30
26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
    
 
 0.426
A0A5C5FRL0
WD40-repeat-containing domain protein.
    
   0.408
A0A5C5FZ02
E3 ubiquitin protein ligase.
    
   0.407
A0A5C5FN28
Helicase SWR1.
    
   0.402
Your Current Organism:
Rhodotorula diobovata
NCBI taxonomy Id: 5288
Other names: ATCC 22265, CBS 6085, CCRC 22473, CCRC:22473, IGC 4364, JCM 3787, MUCL 30314, NCYC 2642, NRRL Y-7196, R. diobovata, Rhodosporidium diobovatum, Rhodotorula diobovata (S.Y. Newell & I.L. Hunter) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.