STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C5FX04Serine/threonine-protein kinase ATG1. (1110 aa)    
Predicted Functional Partners:
A0A5C5G4V9
Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily.
   
 0.998
A0A5C5FTG0
Autophagy-related protein.
   
 0.997
A0A5C5FXI1
Autophagy protein Apg6-domain-containing protein.
    
 0.997
A0A5C5FY60
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
   
 0.997
A0A5C5G127
Autophagy-related protein 2.
   
 0.996
A0A5C5G315
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.994
A0A5C5FR81
ATG11 domain-containing protein.
    
 0.992
A0A5C5G9L8
Uncharacterized protein.
    
 0.991
A0A5C5G311
Other/VPS15 protein kinase.
    
 0.990
A0A5C5G957
Phosphatidylinositol 3-kinase VPS34.
    
 0.990
Your Current Organism:
Rhodotorula diobovata
NCBI taxonomy Id: 5288
Other names: ATCC 22265, CBS 6085, CCRC 22473, CCRC:22473, IGC 4364, JCM 3787, MUCL 30314, NCYC 2642, NRRL Y-7196, R. diobovata, Rhodosporidium diobovatum, Rhodotorula diobovata (S.Y. Newell & I.L. Hunter) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.