STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C5FZN8GPI biosynthesis protein family Pig-F-domain-containing protein. (282 aa)    
Predicted Functional Partners:
A0A5C5G4C2
Uncharacterized protein.
    
 0.954
A0A5C5FPY7
Mannosyltransferase.
     
 0.940
A0A5C5G2C8
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.
   
 
 0.935
A0A5C5FP77
Alkaline-phosphatase-like protein.
    
 0.934
A0A5C5FMK9
GPI transamidase component PIG-T.
     
 0.913
A0A5C5G4Q2
Phosphatidylinositol-glycan biosynthesis class S protein-domain-containing protein.
     
 0.905
A0A5C5FRA5
GPI-anchor transamidase.
     
 0.899
A0A5C5FM24
GPI transamidase subunit PIG-U.
     
 0.892
A0A5C5FMF8
Phosphatidylinositolglycan class N-domain-containing protein.
    
 0.778
A0A5C5G2F0
Alkaline-phosphatase-like protein.
    
 0.682
Your Current Organism:
Rhodotorula diobovata
NCBI taxonomy Id: 5288
Other names: ATCC 22265, CBS 6085, CCRC 22473, CCRC:22473, IGC 4364, JCM 3787, MUCL 30314, NCYC 2642, NRRL Y-7196, R. diobovata, Rhodosporidium diobovatum, Rhodotorula diobovata (S.Y. Newell & I.L. Hunter) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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