Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A5C5FKF5 | A0A5C5FW49 | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q). | Cytochrome b5-like heme/steroid binding domain-containing protein; Belongs to the cytochrome b5 family. | 0.650 |
A0A5C5FKF5 | A0A5C5FWV1 | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q). | Tryptophan synthase. | 0.626 |
A0A5C5FKF5 | A0A5C5FZP6 | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q). | Pyridoxal phosphate-dependent transferase. | 0.632 |
A0A5C5FKF5 | A0A5C5G040 | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q). | Fungal-specific transcription factor domain-containing protein. | 0.561 |
A0A5C5FKF5 | A0A5C5G2Y0 | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q). | Putative 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.561 |
A0A5C5FKF5 | A0A5C5G4U7 | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q). | Nitrate reductase. | 0.914 |
A0A5C5FW49 | A0A5C5FKF5 | Cytochrome b5-like heme/steroid binding domain-containing protein; Belongs to the cytochrome b5 family. | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q). | 0.650 |
A0A5C5FW49 | A0A5C5FWC9 | Cytochrome b5-like heme/steroid binding domain-containing protein; Belongs to the cytochrome b5 family. | FAD binding domain-containing protein. | 0.647 |
A0A5C5FW49 | A0A5C5FWV1 | Cytochrome b5-like heme/steroid binding domain-containing protein; Belongs to the cytochrome b5 family. | Tryptophan synthase. | 0.770 |
A0A5C5FW49 | A0A5C5FZP6 | Cytochrome b5-like heme/steroid binding domain-containing protein; Belongs to the cytochrome b5 family. | Pyridoxal phosphate-dependent transferase. | 0.732 |
A0A5C5FW49 | A0A5C5G4U7 | Cytochrome b5-like heme/steroid binding domain-containing protein; Belongs to the cytochrome b5 family. | Nitrate reductase. | 0.975 |
A0A5C5FWC9 | A0A5C5FW49 | FAD binding domain-containing protein. | Cytochrome b5-like heme/steroid binding domain-containing protein; Belongs to the cytochrome b5 family. | 0.647 |
A0A5C5FWC9 | A0A5C5FWV1 | FAD binding domain-containing protein. | Tryptophan synthase. | 0.626 |
A0A5C5FWC9 | A0A5C5FZP6 | FAD binding domain-containing protein. | Pyridoxal phosphate-dependent transferase. | 0.643 |
A0A5C5FWC9 | A0A5C5G040 | FAD binding domain-containing protein. | Fungal-specific transcription factor domain-containing protein. | 0.561 |
A0A5C5FWC9 | A0A5C5G2Y0 | FAD binding domain-containing protein. | Putative 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.561 |
A0A5C5FWC9 | A0A5C5G4U7 | FAD binding domain-containing protein. | Nitrate reductase. | 0.912 |
A0A5C5FWV1 | A0A5C5FKF5 | Tryptophan synthase. | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q). | 0.626 |
A0A5C5FWV1 | A0A5C5FW49 | Tryptophan synthase. | Cytochrome b5-like heme/steroid binding domain-containing protein; Belongs to the cytochrome b5 family. | 0.770 |
A0A5C5FWV1 | A0A5C5FWC9 | Tryptophan synthase. | FAD binding domain-containing protein. | 0.626 |
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