STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C5G1B8Putative DNA polymerase. (197 aa)    
Predicted Functional Partners:
A0A5C5G1B9
CBFD_NFYB_HMF domain-containing protein.
    
 0.984
A0A5C5G0J6
Histone-fold-containing protein.
   
 0.969
A0A5C5FUL6
CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B-domain-containing protein.
    
 0.968
A0A5C5G4G9
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
    
 0.804
A0A5C5FMD3
DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.
     
 0.765
A0A5C5FQZ6
Kinase-like domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.600
A0A5C5FWA7
Cyclin-dependent kinase 2; Belongs to the protein kinase superfamily.
   
 0.600
A0A5C5G2T4
Cyclin-dependent protein kinase; Belongs to the protein kinase superfamily.
   
 0.600
A0A5C5FSW5
DNA-directed RNA polymerase.
   
 
  0.571
A0A5C5FZN3
DNA-directed RNA polymerase II subunit E.
   
 
 0.571
Your Current Organism:
Rhodotorula diobovata
NCBI taxonomy Id: 5288
Other names: ATCC 22265, CBS 6085, CCRC 22473, CCRC:22473, IGC 4364, JCM 3787, MUCL 30314, NCYC 2642, NRRL Y-7196, R. diobovata, Rhodosporidium diobovatum, Rhodotorula diobovata (S.Y. Newell & I.L. Hunter) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.