Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A5C5FNU1 | A0A5C5G1I5 | Acyl transferase/acyl hydrolase/lysophospholipase. | Lipase. | 0.956 |
A0A5C5FRH3 | A0A5C5FS45 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy. | Cysteine protease ATG4. | 0.673 |
A0A5C5FRH3 | A0A5C5FTG0 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy. | Autophagy-related protein. | 0.948 |
A0A5C5FRH3 | A0A5C5FV52 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy. | Autophagy protein 5; Involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. | 0.998 |
A0A5C5FRH3 | A0A5C5FX04 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy. | Serine/threonine-protein kinase ATG1. | 0.976 |
A0A5C5FRH3 | A0A5C5G127 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy. | Autophagy-related protein 2. | 0.548 |
A0A5C5FRH3 | A0A5C5G1I5 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy. | Lipase. | 0.959 |
A0A5C5FRH3 | A0A5C5G2R3 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy. | Autophagy-related protein 3. | 0.998 |
A0A5C5FRH3 | A0A5C5G3M8 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy. | Autophagy protein 16-domain-containing protein. | 0.994 |
A0A5C5FRH3 | A0A5C5G4T1 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy. | Putative phosphoinositide binding protein. | 0.957 |
A0A5C5FS45 | A0A5C5FRH3 | Cysteine protease ATG4. | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy. | 0.673 |
A0A5C5FS45 | A0A5C5FTG0 | Cysteine protease ATG4. | Autophagy-related protein. | 0.996 |
A0A5C5FS45 | A0A5C5FV52 | Cysteine protease ATG4. | Autophagy protein 5; Involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. | 0.623 |
A0A5C5FS45 | A0A5C5FX04 | Cysteine protease ATG4. | Serine/threonine-protein kinase ATG1. | 0.973 |
A0A5C5FS45 | A0A5C5G127 | Cysteine protease ATG4. | Autophagy-related protein 2. | 0.563 |
A0A5C5FS45 | A0A5C5G1I5 | Cysteine protease ATG4. | Lipase. | 0.966 |
A0A5C5FS45 | A0A5C5G2R3 | Cysteine protease ATG4. | Autophagy-related protein 3. | 0.788 |
A0A5C5FS45 | A0A5C5G3M8 | Cysteine protease ATG4. | Autophagy protein 16-domain-containing protein. | 0.579 |
A0A5C5FS45 | A0A5C5G4T1 | Cysteine protease ATG4. | Putative phosphoinositide binding protein. | 0.761 |
A0A5C5FTG0 | A0A5C5FRH3 | Autophagy-related protein. | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy. | 0.948 |
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