STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C5G3N9Uncharacterized protein. (319 aa)    
Predicted Functional Partners:
A0A5C5FP16
Uncharacterized protein.
    
 0.611
A0A5C5FUF6
SKIP/SNW domain-containing protein.
    
  0.558
A0A5C5FLP3
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.550
A0A5C5FYZ0
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.550
A0A5C5G186
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.550
A0A5C5FW80
Uncharacterized protein.
    
  0.539
A0A5C5G457
Uncharacterized protein.
    
  0.516
A0A5C5G6L5
Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.
    
 0.512
A0A5C5FQ36
RNA polymerase III transcription factor IIIC subunit-domain-containing protein.
    
  0.508
A0A5C5FY39
Multidrug resistance protein.
    
  0.505
Your Current Organism:
Rhodotorula diobovata
NCBI taxonomy Id: 5288
Other names: ATCC 22265, CBS 6085, CCRC 22473, CCRC:22473, IGC 4364, JCM 3787, MUCL 30314, NCYC 2642, NRRL Y-7196, R. diobovata, Rhodosporidium diobovatum, Rhodotorula diobovata (S.Y. Newell & I.L. Hunter) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.