STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C5G4T0Mss4-like protein; Belongs to the TCTP family. (167 aa)    
Predicted Functional Partners:
A0A5C5FM33
Elongation factor 1-gamma 1.
   
 
 0.994
A0A5C5G1V4
Elongation factor 1-beta.
  
 
 0.976
A0A5C5G1J9
Putative CPC2 protein.
   
 
 0.961
A0A5C5G5V3
60S ribosomal protein L9.
   
 
 0.948
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
   0.947
A0A5C5G083
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
   
 
 0.947
A0A5C5G3S2
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
   0.947
A0A5C5G4V1
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 
 0.941
A0A5C5FMU8
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
   
   0.937
A0A5C5FP99
50S ribosomal protein L30e-like protein.
   
 
 0.937
Your Current Organism:
Rhodotorula diobovata
NCBI taxonomy Id: 5288
Other names: ATCC 22265, CBS 6085, CCRC 22473, CCRC:22473, IGC 4364, JCM 3787, MUCL 30314, NCYC 2642, NRRL Y-7196, R. diobovata, Rhodosporidium diobovatum, Rhodotorula diobovata (S.Y. Newell & I.L. Hunter) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.