Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A5C5FM91 | A0A5C5G2I5 | S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. | Acetyl-coenzyme A synthetase. | 0.455 |
A0A5C5FM91 | A0A5C5G4D0 | S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. | NADP-dependent alcohol dehydrogenase. | 0.921 |
A0A5C5FM91 | A0A5C5G545 | S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.887 |
A0A5C5FTE6 | A0A5C5FWV1 | Pantothenate synthetase. | Tryptophan synthase. | 0.589 |
A0A5C5FTE6 | A0A5C5G2Y0 | Pantothenate synthetase. | Putative 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.893 |
A0A5C5FTE6 | A0A5C5G545 | Pantothenate synthetase. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.857 |
A0A5C5FVK3 | A0A5C5FZA7 | Aldehyde/histidinol dehydrogenase. | 3-hydroxyacyl-CoA dehydrogenase. | 0.795 |
A0A5C5FVK3 | A0A5C5FZR4 | Aldehyde/histidinol dehydrogenase. | 3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. | 0.934 |
A0A5C5FVK3 | A0A5C5FZV1 | Aldehyde/histidinol dehydrogenase. | Methylmalonate-semialdehyde dehydrogenase. | 0.951 |
A0A5C5FVK3 | A0A5C5G2I5 | Aldehyde/histidinol dehydrogenase. | Acetyl-coenzyme A synthetase. | 0.809 |
A0A5C5FVK3 | A0A5C5G2Y0 | Aldehyde/histidinol dehydrogenase. | Putative 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.853 |
A0A5C5FVK3 | A0A5C5G545 | Aldehyde/histidinol dehydrogenase. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.852 |
A0A5C5FWV1 | A0A5C5FTE6 | Tryptophan synthase. | Pantothenate synthetase. | 0.589 |
A0A5C5FWV1 | A0A5C5G2I5 | Tryptophan synthase. | Acetyl-coenzyme A synthetase. | 0.535 |
A0A5C5FWV1 | A0A5C5G2Y0 | Tryptophan synthase. | Putative 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.416 |
A0A5C5FWV1 | A0A5C5G545 | Tryptophan synthase. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.871 |
A0A5C5FZA7 | A0A5C5FVK3 | 3-hydroxyacyl-CoA dehydrogenase. | Aldehyde/histidinol dehydrogenase. | 0.795 |
A0A5C5FZA7 | A0A5C5FZR4 | 3-hydroxyacyl-CoA dehydrogenase. | 3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. | 0.914 |
A0A5C5FZA7 | A0A5C5FZV1 | 3-hydroxyacyl-CoA dehydrogenase. | Methylmalonate-semialdehyde dehydrogenase. | 0.795 |
A0A5C5FZA7 | A0A5C5G2I5 | 3-hydroxyacyl-CoA dehydrogenase. | Acetyl-coenzyme A synthetase. | 0.918 |
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