STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C5G5T3P-loop containing nucleoside triphosphate hydrolase protein. (669 aa)    
Predicted Functional Partners:
A0A5C5FV23
Brix domain-containing protein.
   
 
 0.990
A0A5C5G5Y4
CBF/Mak21 family-domain-containing protein.
   
 
 0.983
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.966
A0A5C5G1U0
Brix domain-containing protein.
   
   0.966
A0A5C5FN59
Eukaryotic rRNA processing protein EBP2-domain-containing protein.
   
 0.958
A0A5C5G323
RRM domain-containing protein.
   
 0.957
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.956
A0A5C5FR57
ATP-dependent RNA helicase ROK1; Belongs to the DEAD box helicase family.
  
0.955
A0A5C5G6G7
Utp14 protein-domain-containing protein.
   
 0.955
A0A5C5FJL8
WD40-repeat-containing domain protein.
   
 0.953
Your Current Organism:
Rhodotorula diobovata
NCBI taxonomy Id: 5288
Other names: ATCC 22265, CBS 6085, CCRC 22473, CCRC:22473, IGC 4364, JCM 3787, MUCL 30314, NCYC 2642, NRRL Y-7196, R. diobovata, Rhodosporidium diobovatum, Rhodotorula diobovata (S.Y. Newell & I.L. Hunter) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.