STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C5G619Pinin_SDK_memA domain-containing protein. (459 aa)    
Predicted Functional Partners:
A0A5C5FU19
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family.
    
 0.905
A0A5C5FYQ3
Protein mago nashi.
   
 0.860
A0A5C5FK60
RRM domain-containing protein.
   
 0.845
A0A5C5G535
Polyadenylate-binding protein 2.
   
 0.845
A0A5C5FNZ4
Uncharacterized protein.
   
 0.794
A0A5C5FVT3
Uncharacterized protein.
   
 0.794
A0A5C5G2Y2
PWI domain-containing protein.
   
 0.794
A0A5C5G744
Smg-4/UPF3 family-domain-containing protein.
   
 
 0.790
A0A5C5FL84
Y14 protein.
    
 0.783
A0A5C5FTA2
Uncharacterized protein.
   
  0.779
Your Current Organism:
Rhodotorula diobovata
NCBI taxonomy Id: 5288
Other names: ATCC 22265, CBS 6085, CCRC 22473, CCRC:22473, IGC 4364, JCM 3787, MUCL 30314, NCYC 2642, NRRL Y-7196, R. diobovata, Rhodosporidium diobovatum, Rhodotorula diobovata (S.Y. Newell & I.L. Hunter) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.