STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_002107Putative formin-like protein 2. (1066 aa)    
Predicted Functional Partners:
CDC42
Cell division control protein 42-like isoform 2.
   
 0.874
ENSSMAP00000029025
annotation not available
   
 0.874
SMAX5B_002724
Putative nephrocystin-4.
    
 0.824
SMAX5B_012003
Cell division control protein 42-like isoform 2.
   
 0.805
SMAX5B_003136
Cell division control protein 42-like.
   
 0.805
SMAX5B_016705
Ras-related C3 botulinum toxin substrate 3.
   
 0.671
RAC1
Putative ras-related C3 botulinum toxin substrate 1.
   
 0.671
SMAX5B_004378
Ras-related C3 botulinum toxin substrate 1.
   
 0.671
Rac1
Ras-related C3 botulinum toxin substrate 1.
   
 0.671
ENSSMAP00000034604
annotation not available
   
 0.671
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.