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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_002108Putative dnaJ-like subfamily C member 27. (275 aa)    
Predicted Functional Partners:
SMAX5B_012637
Putative intersectin-2.
    
 0.898
SMAX5B_008282
Putative intersectin-2.
    
 0.898
SMAX5B_007298
Uncharacterized protein.
   
 0.860
SMAX5B_012611
Uncharacterized protein.
    
 0.844
SMAX5B_008644
Putative intersectin-1-like.
    
 0.843
ENSSMAP00000002370
annotation not available
    
 0.843
SMAX5B_007873
Putative RING-H2 finger protein ATL58-like.
  
 0.842
SMAX5B_003584
Putative ras-related protein Rab-14.
   
 
0.810
SMAX5B_015253
Putative actin filament-associated protein 1-like 1.
   
 
0.810
SMAX5B_005889
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
    
 0.801
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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