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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_002147Tr-type G domain-containing protein. (1023 aa)    
Predicted Functional Partners:
SMAX5B_008251
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.995
SMAX5B_000679
40S ribosomal protein S3 isoform 2; Belongs to the universal ribosomal protein uS3 family.
  
 
 0.989
SMAX5B_018296
60S ribosomal protein L8 isoform 3.
  
 0.987
SMAX5B_005763
Putative 40S ribosomal protein S15-like isoform 3; Belongs to the universal ribosomal protein uS19 family.
  
 
 0.987
RPL27A
Putative 60S ribosomal protein L27a-like; Belongs to the universal ribosomal protein uL15 family.
  
 0.986
SMAX5B_012047
Putative 40S ribosomal protein S9 isoform 2; Belongs to the universal ribosomal protein uS4 family.
  
 
 0.983
ENSSMAP00000016109
Ribosomal protein L23a.
  
 
 0.982
SMAX5B_008632
40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
  
 
 0.979
SMAX5B_016810
Putative 39S ribosomal protein L2 mitochondrial.
  
 0.979
SMAX5B_015821
Putative 39S ribosomal protein L9 mitochondrial.
   
 0.978
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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