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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_002142Putative F-box only protein 3. (456 aa)    
Predicted Functional Partners:
SMAX5B_004110
S-phase kinase-associated protein 1-like protein; Belongs to the SKP1 family.
    
 
 0.924
SMAX5B_009686
Cullin-1; Belongs to the cullin family.
    
 
 0.910
SMAX5B_012708
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
  
  
 0.714
SMAX5B_006467
Putative RING-box protein 1-like.
    
 
 0.714
SMAX5B_003491
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
  
  
 0.714
SMAX5B_010976
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
  
  
 0.714
SMAX5B_016322
Putative serum response factor-binding protein 1.
  
  
 0.714
CUL3
Cullin-3; Belongs to the cullin family.
    
 
 0.699
SMAX5B_003815
Cullin-3; Belongs to the cullin family.
    
 
 0.699
SMAX5B_009532
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
  
  
 0.572
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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