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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_003945Uncharacterized protein. (963 aa)    
Predicted Functional Partners:
SMAX5B_005576
RNA-binding protein 39.
   
  0.947
SMAX5B_014496
RNA binding motif protein 39b.
   
  0.947
SMAX5B_011741
Putative histone-lysine N-methyltransferase SETD2 isoform 2.
   
 0.883
SMAX5B_019619
Putative adenylate kinase 9 isoform 2.
    
  0.878
SMAX5B_000427
Uncharacterized protein.
    
 0.876
SMAX5B_018361
Putative E3 SUMO-protein ligase RanBP2.
   
 0.867
SMAX5B_010234
Splicing factor 3B subunit 1.
   
   0.854
SMAX5B_017134
Serine/threonine-protein kinase PRP4-like isoform 2.
   
   0.842
SMAX5B_000135
Putative RNA-binding protein 25-like.
   
 
 0.825
SMAX5B_009131
Putative RNA-binding protein 25-like.
   
 
 0.825
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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