STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_009496Putative laminin subunit beta-1. (1799 aa)    
Predicted Functional Partners:
SMAX5B_013855
Putative laminin subunit gamma-3-like.
   
0.994
SMAX5B_017671
Putative laminin subunit alpha-3-like; Belongs to the peptidase C1 family.
   
0.955
ITGA7
Putative integrin alpha-7; Belongs to the integrin alpha chain family.
    
 0.937
SMAX5B_020277
Putative integrin alpha-3; Belongs to the integrin alpha chain family.
    
 0.934
SMAX5B_006633
Putative integrin alpha-6-like; Belongs to the integrin alpha chain family.
    
 0.920
SMAX5B_009304
Putative integrin alpha-6-like; Belongs to the integrin alpha chain family.
    
 0.920
SMAX5B_018621
Putative integrin alpha-6-like; Belongs to the integrin alpha chain family.
    
 0.920
LAMA2
Putative laminin subunit alpha-2.
   
0.912
ENSSMAP00000004730
Integrin, beta 1a.
    
 0.910
SMAX5B_007191
Integrin beta; Belongs to the integrin beta chain family.
    
 0.910
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.