STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_006014Dynein assembly factor 1, axonemal. (345 aa)    
Predicted Functional Partners:
SMAX5B_021305
Protein phosphatase 1 regulatory subunit 11.
   
 
 0.972
SMAX5B_009532
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
 
 
 0.930
SMAX5B_000179
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
 
 
 0.930
ENSSMAP00000003580
Protein phosphatase 1 catalytic subunit beta.
 
 
 0.930
SMAX5B_011189
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
 
 
 0.930
SMAX5B_020337
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
 
 
 0.930
PP1cb
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
 
 
 0.930
SMAX5B_011630
Putative NSFL1 cofactor p47.
   
 
 0.888
SMAX5B_009275
Aurora kinase B; Belongs to the protein kinase superfamily.
    
 
 0.800
SMAX5B_005156
Serine/threonine-protein kinase 6; Belongs to the protein kinase superfamily.
    
 
 0.800
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.