STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_012295Retinaldehyde dehydrogenase 2; Belongs to the aldehyde dehydrogenase family. (628 aa)    
Predicted Functional Partners:
ALDH18A1
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
  
 
 0.921
SMAX5B_017306
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
  
 
 0.921
SMAX5B_006832
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
  
 
 0.918
SMAX5B_002315
Putative GDH/6PGL endoplasmic bifunctional protein.
  
 0.903
SMAX5B_013122
Bifunctional glutamate/proline--tRNA ligase.
  
 
 0.901
SMAX5B_018385
Putative N-acetylserotonin O-methyltransferase-like protein-like; Belongs to the G-protein coupled receptor 1 family.
  
 
 0.895
SMAX5B_016704
Putative cytochrome P450 26A1; Belongs to the cytochrome P450 family.
  
 
 0.892
SMAX5B_006874
Putative hydroxysteroid dehydrogenase-like protein 2.
  
 0.874
SMAX5B_001894
Retinol dehydrogenase 10-A; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 0.873
SMAX5B_002216
Putative retinol dehydrogenase 10-like; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 0.873
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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