close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSMAP00000001009Dihydrouridine synthase 2. (548 aa)    
Predicted Functional Partners:
SMAX5B_013122
Bifunctional glutamate/proline--tRNA ligase.
  
 
 0.993
SMAX5B_013882
Putative ribosome biogenesis protein BRX1-like.
   
    0.813
SMAX5B_002554
Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.
   
    0.786
SMAX5B_002206
Putative something about silencing protein 10.
   
    0.773
SMAX5B_013445
Putative 18S rRNA (Guanine-N(7))-methyltransferase isoform 2.
  
    0.769
SMAX5B_011449
Putative THUMP domain-containing protein 1.
  
 
 0.765
SMAX5B_017350
Putative tRNA pseudouridine(38/39) synthase isoform 2.
  
 
 0.726
SMAX5B_021483
Putative tRNA-dihydrouridine(16/17) synthase.
   
  
0.725
SMAX5B_011680
Putative guanine nucleotide-binding protein-like 1.
   
    0.717
SMAX5B_003283
Putative methyltransferase NSUN5; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
  
 
 0.698
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.