STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_005961Putative presenilins-associated rhomboid-like protein mitochondrial. (389 aa)    
Predicted Functional Partners:
SMAX5B_014957
Putative serine/threonine-protein kinase PINK1 mitochondrial.
    
 
 0.861
ENSSMAP00000026198
Stomatin (EPB72)-like 2.
  
 0.806
SMAX5B_002057
ATP-dependent metalloprotease YME1L1 isoform 2.
  
 
 0.754
SMAX5B_006168
Putative ATP-dependent zinc metalloprotease YME1L1-like.
  
 
 0.754
SMAX5B_022276
Putative dynamin-like 120 kDa protein mitochondrial; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
   
 
 0.709
SMAX5B_022306
Putative mitochondrial import inner membrane translocase subunit Tim13; Belongs to the small Tim family.
      
 0.690
SMAX5B_007245
Putative cytochrome c oxidase assembly protein COX11 mitochondrial.
  
  
 0.687
SMAX5B_009355
Mitochondrial import inner membrane translocase subunit Tim8 A isoform 3; Belongs to the small Tim family.
      
 0.676
SMAX5B_007274
Putative NADH dehydrogenase isoform 2.
      
 0.672
TIMM22
Putative mitochondrial import inner membrane translocase subunit Tim22.
      
 0.672
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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