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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_007775Putative nuclear respiratory factor 1. (541 aa)    
Predicted Functional Partners:
ENSSMAP00000018886
Peroxisome proliferator-activated receptor gamma, coactivator 1 alpha.
   
 0.949
SMAX5B_018077
Putative peroxisome proliferator-activated receptor gamma coactivator-related protein 1 isoform 2.
   
 0.878
SMAX5B_001922
Putative peroxisome proliferator-activated receptor gamma coactivator-related protein 1-like.
   
 0.874
SMAX5B_008879
Pre-mRNA-splicing factor RBM22.
   
 0.854
SMAX5B_009170
Putative peroxisome proliferator-activated receptor gamma coactivator 1-beta-like.
     
 0.830
SMAX5B_016689
Transcription factor A mitochondrial.
     
 0.699
SMAX5B_008649
Putative NAD-dependent protein deacetylase sirtuin-1.
    
 
 0.583
SMAX5B_009669
Putative nuclear factor erythroid 2-related factor 1-like.
    
 
 0.573
SMAX5B_001662
Putative NAD-dependent protein deacetylase sirtuin-7.
    
 
 0.564
SMAX5B_018542
Putative GA-binding protein alpha chain.
     
 0.564
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.