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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_000673Uncharacterized protein. (1298 aa)    
Predicted Functional Partners:
ENSSMAP00000020454
Cofilin 2 (muscle).
    
 0.909
ENSSMAP00000027277
Cofilin 1.
    
 0.909
ENSSMAP00000015637
annotation not available
    
 0.872
SMAX5B_003524
Uncharacterized protein.
  
  
 
0.814
SMAX5B_008904
Uncharacterized protein.
  
  
 
0.808
SMAX5B_016529
Uncharacterized protein.
  
  
 
0.807
SMAX5B_000551
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.700
SMAX5B_021429
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.700
SMAX5B_008891
Mitogen-activated protein kinase.
   
 0.695
SMAX5B_017966
Mitogen-activated protein kinase.
   
 0.695
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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