STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_011344Putative ERI1 exoribonuclease 2. (728 aa)    
Predicted Functional Partners:
SMAX5B_012248
Putative oocyte-specific histone RNA stem-loop-binding protein 2-like.
   
 
 0.750
SMAX5B_006922
Putative histone RNA hairpin-binding protein-like isoform 2.
   
 
 0.750
SMAX5B_019872
Putative exosome complex component RRP46.
   
 0.707
SMAX5B_007646
Endoribonuclease dicer-like protein; Belongs to the helicase family. Dicer subfamily.
    
 
 0.679
SMAX5B_003963
Putative exosome complex component MTR3.
   
 0.674
SMAX5B_005803
Exosome complex exonuclease RRP41.
   
 0.674
SMAX5B_017388
Putative 60S ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family.
     
 0.667
SMAX5B_015573
60S ribosomal protein L30.
     
 0.661
SMAX5B_010113
60S ribosomal protein L4-B.
    
 0.652
SMAX5B_018296
60S ribosomal protein L8 isoform 3.
   
 
  0.628
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.