Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SMAX5B_011081Putative deoxyribonuclease gamma-like. (333 aa)    
Predicted Functional Partners:
ENSSMAP00000003899
annotation not available
    
   0.764
SMAX5B_014187
Putative PHD finger protein 13.
    
   0.760
SMAX5B_009078
Putative mitochondrial 2-oxodicarboxylate carrier; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
   0.760
SMAX5B_018110
T-box transcription factor TBX20.
    
   0.755
ENSSMAP00000009389
Signal peptidase complex subunit 2.
    
 
 0.710
ENSSMAP00000010760
Signal peptidase complex subunit 1.
    
   0.704
SMAX5B_005217
FAM212 domain containing protein.
    
   0.696
SMAX5B_007747
Putative proline-rich protein 5-like.
      
 0.583
SMAX5B_001288
Putative biliverdin reductase A.
    
   0.580
SMAX5B_000200
Eukaryotic translation initiation factor 2 subunit 1.
    
   0.579
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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