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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_007918Putative homocysteine S-methyltransferase 1-like. (326 aa)    
Predicted Functional Partners:
SMAX5B_022673
Putative cystathionine gamma-lyase isoform 2.
  
 
 0.961
SMAX5B_000518
Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
  
 
 0.944
SMAX5B_006832
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
  
 
 0.925
CBS
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
 
 0.906
SMAX5B_008683
Putative threo-3-hydroxyaspartate ammonia-lyase-like.
  
 0.897
SMAX5B_005162
Putative methionine--tRNA ligase cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.889
ENSSMAP00000003252
Methionine adenosyltransferase I, alpha.
  
 
 0.887
SMAX5B_020568
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
  
 
 0.887
ENSSMAP00000026755
Methionine adenosyltransferase II, alpha b.
  
 
 0.887
SMAX5B_003546
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
  
 
 0.887
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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