STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSMAP00000001225annotation not available (354 aa)    
Predicted Functional Partners:
SMAX5B_018254
Transcription factor.
   
 0.964
ENSSMAP00000014869
annotation not available
   
 0.945
SMAX5B_004320
Putative short transient receptor potential channel 2-like; Belongs to the transient receptor (TC 1.A.4) family.
   
 0.945
SMAX5B_008066
Putative retinoblastoma-like protein 1.
   
 0.943
SMAX5B_019604
DIRP domain-containing protein.
    
 0.861
SMAX5B_016573
Mothers against decapentaplegic homolog.
    
 0.848
SMAX5B_003618
Mothers against decapentaplegic homolog.
    
 0.848
SMAX5B_021315
Mothers against decapentaplegic homolog.
    
 0.844
SMAX5B_006207
Putative transcription factor E2F5-like.
  
  
 
0.834
SMAX5B_017846
Putative transcription factor E2F4.
  
  
 
0.826
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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