Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_006214Putative paired box protein Pax-3-like. (485 aa)    
Predicted Functional Partners:
SMAX5B_006286
Transcription factor Sox10b.
   
 0.825
TIMM22
Putative mitochondrial import inner membrane translocase subunit Tim22.
    
 0.805
SMAX5B_011937
Catenin beta-1.
    
 0.762
SMAX5B_022456
Forkhead box D3.
    
 0.740
SMAX5B_014269
Putative microphthalmia-associated transcription factor-like.
    
 0.736
SMAX5B_011571
Putative lymphoid enhancer-binding factor 1-like.
    
 0.692
SMAX5B_001058
Mitochondrial import inner membrane translocase subunit Tim9.
   
 
 0.689
SMAX5B_019780
Mitochondrial import inner membrane translocase subunit Tim10.
   
 0.670
SMAX5B_021075
SRY-box containing 8.
   
 0.662
SMAX5B_008412
Succinate dehydrogenase [ubiquinone] cytochrome b small subunit; Membrane-anchoring subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q); Belongs to the CybS family.
    
 0.655
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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