STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_007087Putative short transient receptor potential channel 5-like. (714 aa)    
Predicted Functional Partners:
SMAX5B_004435
Putative short transient receptor potential channel 5.
 
     0.921
SMAX5B_001823
Transient receptor potential cation channel subfamily c member 1; Belongs to the transient receptor (TC 1.A.4) family.
    
0.867
MPDZ
Putative multiple PDZ domain protein.
   
 0.706
MPDZ-2
Putative multiple PDZ domain protein-like.
   
 0.706
SMAX5B_017669
Putative E3 ubiquitin-protein ligase LNX.
   
 0.706
ENSSMAP00000023394
annotation not available
   
 0.706
SMAX5B_001829
Putative ligand of Numb protein X 2.
   
 0.706
SMAX5B_009314
Putative ligand of Numb protein X 2-like.
   
 0.706
SMAX5B_011511
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
   
 0.695
SMAX5B_020784
Phorbol-ester/DAG-type domain-containing protein.
   
 0.695
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.