STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_019523Putative GDP-fucose protein O-fucosyltransferase 1. (395 aa)    
Predicted Functional Partners:
SMAX5B_018416
Putative ATP-binding cassette sub-family A member 12.
     
 0.933
SMAX5B_015274
CAP10 domain-containing protein.
   
 
 0.745
SMAX5B_004056
Putative transducin beta-like protein 2.
   
    0.742
SMAX5B_002123
Putative coagulation factor VII.
    
   0.589
SMAX5B_002151
Putative coagulation factor VII-like.
    
   0.589
SMAX5B_002105
Putative coagulation factor X.
    
   0.589
SMAX5B_002156
Putative coagulation factor X.
    
   0.589
SMAX5B_006790
Putative coagulation factor IX-like.
    
   0.589
SMAX5B_017201
Putative coagulation factor IX-like.
    
   0.589
SMAX5B_009333
Putative coagulation factor IX.
    
   0.589
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.