Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ENSSMAP00000001301D-aminoacyl-tRNA deacylase 2. (256 aa)    
Predicted Functional Partners:
PPP6C
Serine/threonine-protein phosphatase.
   
   0.694
SMAX5B_013724
Putative RNA-binding protein 42.
      
 0.682
SMAX5B_016099
Putative iron-sulfur protein NUBPL.
  
  
 0.639
SMAX5B_006947
Tyrosine--tRNA ligase.
   
 
 0.613
ENSSMAP00000033406
annotation not available
     
 0.535
SMAX5B_004651
Putative sec1 family domain-containing protein 1; Belongs to the STXBP/unc-18/SEC1 family.
      
 0.515
SMAX5B_002904
Tyrosine--tRNA ligase.
     
 0.498
SMAX5B_004653
Putative cochlin.
      
 0.490
SMAX5B_014585
Putative transmembrane protein 9.
      
 0.490
SMAX5B_012649
Transmembrane protein 9B.
      
 0.490
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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