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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSMAP00000001349KTI12 chromatin associated homolog. (290 aa)    
Predicted Functional Partners:
SMAX5B_008100
Putative neuromedin-B receptor; Belongs to the G-protein coupled receptor 1 family.
    
 0.916
SMAX5B_008257
Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation.
   
 
 0.906
SMAX5B_016555
Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family.
    
 
 0.831
SMAX5B_001435
Putative elongator complex protein 5.
   
 
 0.825
SMAX5B_012622
Putative gastrin-releasing peptide receptor-like; Belongs to the G-protein coupled receptor 1 family.
    
 0.815
SMAX5B_018559
Putative gastrin-releasing peptide receptor-like; Belongs to the G-protein coupled receptor 1 family.
    
 0.815
SMAX5B_020647
Putative alpha-sarcoglycan-like.
     
 0.801
SMAX5B_009628
Putative epsilon-sarcoglycan isoform 2.
     
 0.801
ENSSMAP00000011536
SEC11 homolog A, signal peptidase complex subunit.
 
   
 0.798
SMAX5B_013886
Putative gastrin-releasing peptide.
     
 0.788
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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