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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_019950Putative ATP-dependent RNA helicase DHX34. (1154 aa)    
Predicted Functional Partners:
SMAX5B_019672
Putative pre-mRNA-processing factor 17.
   
 0.957
ENSSMAP00000006934
SLU7 homolog, splicing factor.
   
 0.952
SMAX5B_018533
Putative pre-mRNA-splicing factor CWC22-like.
   
 0.948
SMAX5B_003453
Pre-mRNA-splicing factor syf2.
    
 0.946
SMAX5B_002206
Putative something about silencing protein 10.
   
 0.936
SMAX5B_021709
Putative U3 small nucleolar RNA-associated protein 14-like A-like.
   
 0.936
SMAX5B_022517
Putative ATP-dependent RNA helicase DDX49; Belongs to the DEAD box helicase family.
  
 0.934
SMAX5B_003484
Putative digestive organ expansion factor-like.
   
 0.928
ENSSMAP00000008678
PRP18 pre-mRNA processing factor 18 homolog (yeast).
   
 0.924
SMAX5B_000564
Putative WD repeat-containing protein 43-like.
   
 0.924
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.