Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_005743AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (159 aa)    
Predicted Functional Partners:
SMAX5B_012570
AP-1 complex subunit gamma.
    
 0.990
SMAX5B_006418
AP-1 complex subunit gamma.
    
 0.984
SMAX5B_016490
AP complex subunit beta.
    
 0.980
SMAX5B_007276
Adaptor-related protein complex 1 mu 1 subunit; Belongs to the adaptor complexes medium subunit family.
   
 0.979
SMAX5B_006295
Putative AP-1 complex subunit mu-1-like; Belongs to the adaptor complexes medium subunit family.
    
 0.978
SMAX5B_022487
Putative AP-1 complex subunit mu-1-like; Belongs to the adaptor complexes medium subunit family.
    
 0.978
AP1S2
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
  
  
 
0.901
SMAX5B_007858
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
  
  
 
0.901
SMAX5B_010216
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
  
  
 
0.901
SMAX5B_015284
Putative AP-4 complex subunit beta-1-like.
   
 0.892
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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