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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_008743Putative WW domain binding protein 1-like. (299 aa)    
Predicted Functional Partners:
SMAX5B_014078
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 0.845
SMAX5B_003281
Putative actin-related protein 5; Belongs to the actin family.
    
 0.842
SMAX5B_011949
Putative INO80 complex subunit C.
    
 0.806
SMAX5B_003287
Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily.
    
 0.666
SMAX5B_015320
Histone H2B; Belongs to the histone H2A family.
    
   0.594
SMAX5B_012257
Putative histone H2B type 2-E-like; Belongs to the histone H2A family.
    
   0.594
SMAX5B_006373
Histone H2B; Belongs to the histone H2B family.
    
   0.594
SMAX5B_022561
BRG1/brm-associated factor 53A; Belongs to the actin family.
    
 0.577
ENSSMAP00000003664
annotation not available
    
  0.461
SMAX5B_010294
Putative DNA excision repair protein ERCC-6-like 2.
    
  0.461
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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