Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_011539Caspase-3; Belongs to the peptidase C14A family. (281 aa)    
Predicted Functional Partners:
SMAX5B_018954
Putative E3 ubiquitin-protein ligase XIAP isoform 2.
   
 0.993
SMAX5B_002612
Caspase 9; Belongs to the peptidase C14A family.
    
0.990
SMAX5B_019576
Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair.
    
 0.984
ENSSMAP00000016007
Baculoviral IAP repeat containing 2.
   
 0.979
SMAX5B_006108
Caspase 8; Belongs to the peptidase C14A family.
  
0.974
SMAX5B_020087
Putative baculoviral IAP repeat-containing protein 5-like isoform 2.
   
 0.973
SMAX5B_011725
Putative non-syndromic hearing impairment protein 5-like.
    
 0.973
SMAX5B_002979
Spectrin alpha chain non-erythrocytic 1.
    
 0.970
SMAX5B_018196
Caspase 10; Belongs to the peptidase C14A family.
   
0.970
SMAX5B_009655
Putative non-syndromic hearing impairment protein 5-like.
    
 0.966
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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