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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_001191Voltage-dependent L-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death; Belongs to the calcium channel alpha-1 subunit (TC 1.A.1.11) family. (1662 aa)    
Predicted Functional Partners:
SMAX5B_000427
Uncharacterized protein.
   
 0.997
SMAX5B_020720
Voltage-dependent calcium channel gamma subunit.
   
 0.899
SMAX5B_007369
Voltage-dependent calcium channel gamma-1 subunit; Regulatory subunit of the voltage-gated calcium channel that gives rise to L-type calcium currents in skeletal muscle. Regulates channel inactivation kinetics.
   
 0.899
SMAX5B_016384
Calcium channel beta3 subunit.
   
 0.862
SMAX5B_014833
Calcium channel voltage-dependent beta 3a.
   
 0.862
SMAX5B_001140
Voltage-gated calcium channel beta 4 subunit transcript variant 2.
   
 0.862
SMAX5B_011193
Putative voltage-dependent L-type calcium channel subunit beta-1-like.
   
 0.862
CACNB2
Putative voltage-dependent L-type calcium channel subunit beta-2.
   
 0.862
SMAX5B_013652
Voltage-gated calcium channel beta 4 subunit transcript variant 2.
   
 0.862
SMAX5B_005810
Putative voltage-dependent L-type calcium channel subunit beta-3-like.
   
 0.862
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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