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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_000849Putative phosphorylated adapter RNA export protein. (408 aa)    
Predicted Functional Partners:
SMAX5B_022324
Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]
   
 0.985
NCBP1
Nuclear cap-binding protein subunit 1.
   
 0.952
SMAX5B_002465
GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 0.867
SMAX5B_004230
Putative serrate RNA effector molecule-like isoform 2.
   
 0.865
SMAX5B_004499
Putative serrate RNA effector molecule-like.
   
 0.865
SMAX5B_010956
Putative G-protein coupled receptor 133; Belongs to the G-protein coupled receptor 2 family.
    
 0.841
SMAX5B_012225
Putative pre-mRNA cleavage complex 2 protein Pcf11.
   
 0.764
ENSSMAP00000002993
HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1.
    
 
 0.719
SMAX5B_002365
RNA polymerase II subunit A C-terminal domain phosphatase SSU72.
   
 
  0.659
SMAX5B_002702
Putative transmembrane protein 240-like.
   
 
  0.659
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.