Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SMAX5B_002504Ankyrin repeat domain-containing protein 13D. (629 aa)    
Predicted Functional Partners:
SMAX5B_021166
Putative leucine-rich repeat-containing protein 73.
      
 0.846
SMAX5B_011724
Uncharacterized protein.
    
   0.784
SMAX5B_020362
Putative AP-4 complex accessory subunit tepsin.
      
 0.767
VSIG10
Putative WD repeat and SOCS box-containing protein 2.
      
 0.725
SMAX5B_002253
Putative nitrogen permease regulator 2-like protein-like isoform 4.
      
 0.710
SMAX5B_005806
Putative DNA-directed RNA polymerase III subunit RPC8.
      
 0.708
SMAX5B_003553
Putative UPF0184 protein C9orf16-like.
      
 0.628
SMAX5B_010611
Putative prefoldin subunit 2.
      
 0.606
SMAX5B_016506
Uncharacterized protein.
      
 0.602
SMAX5B_013053
Putative dedicator of cytokinesis protein 3-like; Belongs to the DOCK family.
      
 0.562
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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