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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_018006Paired box protein Pax-2a. (490 aa)    
Predicted Functional Partners:
SMAX5B_007633
Putative homeobox protein goosecoid-like.
    
 
 0.728
SMAX5B_000661
Putative transforming protein p68/c-ets-1-like.
   
 
 0.697
SMAX5B_003529
ETS domain-containing protein.
   
 
 0.697
SMAX5B_022692
Runt-related transcription factor.
    
 0.646
SMAX5B_008152
Runt-related transcription factor.
    
 0.642
SMAX5B_003435
Runt-related transcription factor.
    
 0.642
SMAX5B_017803
Putative core-binding factor subunit beta-like.
     
 0.620
SMAX5B_008570
Putative runt-related transcription factor 3-like.
    
 0.607
ppara1
Peroxisome proliferator-activated receptor alpha.
     
 0.563
PPARG
Peroxisome proliferator activated receptor gamma.
     
 0.563
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.