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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_000821Alpha-carbonic anhydrase domain-containing protein; Belongs to the alpha-carbonic anhydrase family. (278 aa)    
Predicted Functional Partners:
SMAX5B_001315
Brix domain-containing protein 1 isoform 2.
   
 
 0.729
SMAX5B_001942
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
 
 0.641
SMAX5B_015504
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.634
RPL5
60S ribosomal protein L5 isoform 2.
    
 
 0.631
SMAX5B_006174
60S ribosomal protein L5.
    
 
 0.631
SMAX5B_015442
Putative carbonic anhydrase 5B mitochondrial-like; Belongs to the alpha-carbonic anhydrase family.
  
 
 
0.606
SMAX5B_020251
Putative carbonic anhydrase-like; Belongs to the alpha-carbonic anhydrase family.
  
 
0.601
SMAX5B_019850
Putative carbonic anhydrase 4-like; Belongs to the alpha-carbonic anhydrase family.
  
 
0.598
ENSSMAP00000031416
Carbonic anhydrase IV c.
  
 
 
0.593
SMAX5B_004067
Putative carbonic anhydrase 4-like; Belongs to the alpha-carbonic anhydrase family.
  
 
0.589
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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