Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSMAP00000001552annotation not available (230 aa)    
Predicted Functional Partners:
SMAX5B_020095
Putative paired box protein Pax-6-like.
 
  
 
 0.892
SMAX5B_007633
Putative homeobox protein goosecoid-like.
    
 0.776
SMAX5B_022692
Runt-related transcription factor.
    
 0.667
SMAX5B_008429
Putative POU domain class 2-associating factor 1.
   
 
 0.652
SMAX5B_008152
Runt-related transcription factor.
    
 0.651
SMAX5B_003435
Runt-related transcription factor.
    
 0.651
SMAX5B_008570
Putative runt-related transcription factor 3-like.
    
 0.613
SMAX5B_004052
Putative LIM/homeobox protein Lhx1-like.
    
 0.606
SMAX5B_008431
LIM/homeobox protein Lhx1.
   
 0.578
SMAX5B_016988
Putative LIM/homeobox protein Lhx5.
   
 0.577
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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