Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PCMTD2Uncharacterized protein. (416 aa)    
Predicted Functional Partners:
CUL5
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 
 0.776
SMAX5B_008423
Cullin-5; Belongs to the cullin family.
    
 
 0.776
SMAX5B_003110
Nt_Gln_amidase domain-containing protein.
      
 0.671
SMAX5B_008353
Putative ankyrin repeat and EF-hand domain-containing protein 1-like.
      
 0.660
SMAX5B_005351
Putative NADH dehydrogenase; Belongs to the complex I 30 kDa subunit family.
  
   0.657
ENSSMAP00000015577
Solute carrier family 25 member 32a.
      
 0.628
SMAX5B_015841
Putative transmembrane protein 64.
      
 0.627
SMAX5B_010176
Putative RING-box protein 2-like isoform 3.
    
   0.606
SMAX5B_008694
Putative transmembrane protein 254.
   
 
 0.601
SMAX5B_002877
Putative pseudouridylate synthase 7-like.
     
 0.578
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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